Description Usage Arguments Value
View source: R/tree-structure.R
Assigns cells get assigned to segments based on whichever segment visited them
the most often, out of those segments that exist at that cell's pseudotime. This
function is called automatically by buildTree
, but can be re-run
if necessary.
1 | assignCellsToSegments(object, pseudotime, verbose = T)
|
object |
An URD object |
pseudotime |
(Character) Pseudotime to use (i.e. a column name of |
An URD object with segment assignments in object@tree$cells.in.segment
, as a
list by segments, and in object@diff.data$segment
, which allows them "segment"
to be used as a plotting label.
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