Description Usage Arguments Value Examples
Cluster centroids in gene expression space
1 | clusterCentroids(object, clustering, genes.use = object@var.genes)
|
object |
An URD object |
clustering |
(Character) Name of a clustering (i.e. a column in |
genes.use |
(Character vector) Genes to use for calculating distance (default: variable genes, NULL is all genes) |
A data.frame with mean gene expression per cluster in rows, and clusters as columns.
1 | cc <- clusterCentroids(object, "Louvain-15", genes.use=object@var.genes)
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