Plot and trim Dropseq DGE tables by metadata
1 2 3 4 5 6 7 8 9 10 11 | dsMetaTrim(
dge.table,
ds.meta,
cell.name = "CELL",
meta.name,
meta.min = NULL,
meta.max = NULL,
title = "UMIs per cell",
x.lim = NULL,
breaks = 150
)
|
dge.table |
(Matrix or data.frame) Gene expression table |
ds.meta |
(data.frame) Metadata |
cell.name |
(Character) Column name of |
meta.name |
(Character) Column name of |
meta.min |
(Numeric) Minimum acceptable value of metadata (default: NULL) |
meta.max |
(Numeric) Maximum acceptable value of metadata (default: NULL) |
title |
(Character) Histogram title (default: "UMIs per cell") |
breaks |
(Numeric) Histogram bins (default: 150) |
xlim |
(Numeric) Histogram x-axis limits (default: NULL) |
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