cellsInCluster: Return names of cells in a given cluster

In farrellja/URD: URD

Description

Return names of cells in a given cluster

Usage

cellsInCluster(object, clustering, cluster)

Arguments

object	An URD object
clustering	(Character) Name of a column in @group.ids
cluster	(Character vector) Name of 1 or more clusters to return.

Value

Character vector of cell names

Examples

# Get members of cluster 15 from Louvain-10 clustering
cellsInCluster(object, clustering="Louvain=10", cluster="15")

# Get members of segments 29, 32, and 79 from reconstructed tree
cellsInCluster(object, clustering="segment", cluster=c("29","32","79"))

farrellja/URD documentation built on June 17, 2020, 4:48 a.m.