PLSDA.Permut: Permutation PLSDA test

In flajole/MApckg: R package of MetaboAnalyst functions

Description

Perform permutation, using training classification accuracy or separation distance as indicator, for two or multi-groups.

Usage

PLSDA.Permut(dataSet, analSet, num = 100, type = "accu")

Arguments

dataSet	List, data set object generated by MS_to_MA function.
analSet	List, containing the results of statistical analysis (can be just an empty list).
num	The number of permutations.
type	The indicator. If "accu" - training classification accuracy; if "sep" - separation distance.

Value

Native analSet with some elements added:

• $plsda$permut.p -

• $plsda$permut.inf -

• $plsda$permut.type -

• $plsda$permut -

See Also

PLS.Anal, PLS.Loadings, PLSDA.CV, PlotPLS

flajole/MApckg documentation built on May 16, 2019, 1:16 p.m.