PlotRSVM: Plot RSVM

In flajole/MApckg: R package of MetaboAnalyst functions

Description

Set of functions for plotting the results of recursive Support Vector Machine analysis.

PlotRSVM.Classification - plot feature classification.

PlotRSVM.VIP - please note : features are ranked by their frequencies being selected in the best classifiers (only top 15 will be shown)

Usage

PlotRSVM.Classification(dataSet, analSet, imgName = "svm_cls_",
  format = "png", dpi = 72, width = NA)

PlotRSVM.Cmpd(dataSet, analSet, imgName = "svm_imp_", format = "png",
  dpi = 72, width = NA)

Arguments

dataSet	List, data set object generated by MS_to_MA function.
analSet	List, containing the results of statistical analysis (can be just an empty list).
imgName	Image file name prefix.
format	Image format, one of: "png", "tiff", "pdf", "ps", "svg"
dpi	Image resolution.
width	Image width.

See Also

RSVM.Anal for analytical function

flajole/MApckg documentation built on May 16, 2019, 1:16 p.m.