Files in fmsan51/blvibmjp
Individual Based Model of Bovine Leukemia Virus Spread in a Dairy Herd in Japan
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/barn.R
R/blvimbjp-package.R
R/main_function.R
R/parameter.R
R/post_simulation_process.R
R/pre_simulation_process.R
R/probability_function.R
R/save.R
R/setup.R
R/simulation.R
R/sysdata.rda
R/template.R
R/util.R
R/validate.R
R/zzz.R
README.Rmd
README.md
blvibmjp.Rproj
inst/extdata/msg/jp.R
inst/input.xlsx
inst/input_test.xlsx
man/add_1_to_month.Rd
man/add_newborns.Rd
man/area_table.Rd
man/areas.Rd
man/assign_chambers.Rd
man/assign_newborns.Rd
man/blvibmjp-package.Rd
man/calc_ai.Rd
man/calc_infection_in_barns.Rd
man/calc_param.Rd
man/calc_param_both.Rd
man/calc_param_pre.Rd
man/calc_prev.Rd
man/calculate_area_assignment.Rd
man/causes_infected_in_exposed_chamber.Rd
man/change_area.Rd
man/change_infection_status.Rd
man/change_stage.Rd
man/check_removal.Rd
man/classify_date_column.Rd
man/cow_table.Rd
man/cull_infected_cows.Rd
man/days_per_month.Rd
man/define_msg.Rd
man/do_ai.Rd
man/do_test.Rd
man/est_coef_inf_insects.Rd
man/extract_owned_cows.Rd
man/figures/README-plot-1.png
man/figures/README-plot-2.png
man/format_date.Rd
man/heat_cycle.Rd
man/infect.Rd
man/integerize.Rd
man/is.wholenumbers.Rd
man/is_ai_started_heifer.Rd
man/is_ai_started_milking.Rd
man/is_ai_succeeded.Rd
man/is_dried.Rd
man/is_ebl_detected.Rd
man/is_heat_detected.Rd
man/is_infected_by_colostrum.Rd
man/is_infected_in_free_stall.Rd
man/is_infected_in_non_exposed_chamber.Rd
man/is_infected_pasture.Rd
man/is_infected_rp.Rd
man/is_infected_vertical.Rd
man/is_replacement.Rd
man/is_stillbirth.Rd
man/longevity.Rd
man/movement_table.Rd
man/n_month_to_progress.Rd
man/n_month_until_ebl_die.Rd
man/n_newborn_per_dam.Rd
man/param.Rd
man/plot_prev.Rd
man/plot_route.Rd
man/prepare_area.Rd
man/prepare_cows.Rd
man/prepare_data.Rd
man/prepare_movement.Rd
man/process_param.Rd
man/q975.Rd
man/read_cows.Rd
man/read_param.Rd
man/redefine_route_levels.Rd
man/remove_cows.Rd
man/remove_from_areas.Rd
man/remove_na.Rd
man/replace_selected_cows.Rd
man/resample.Rd
man/rp_table.Rd
man/save_file.Rd
man/set_i_month.Rd
man/set_init_chamber_id.Rd
man/set_param.Rd
man/setup_area_table.Rd
man/setup_cows.Rd
man/setup_movement_table.Rd
man/setup_newborn_table.Rd
man/setup_rp_table.Rd
man/sex_newborns.Rd
man/simulate_blv_spread.Rd
man/simulate_once.Rd
man/susceptibility.Rd
man/table_route.Rd
man/table_status.Rd
man/tether_roaming_cows.Rd
man/tie_stall_table.Rd
man/translate_msg.Rd
man/validate_category.Rd
man/validate_cow_table.Rd
man/validate_param.Rd
man/warn_double_sep.Rd
man/warn_invalid_col.Rd
