API for friendsofstrandseq/MaRyam
Genotyping Structural Variants from single-cell Strand-seq data.
| Global functions | |
|---|---|
| SVcalling_wrapperFunc | Man page |
| WCreadCounts | Man page |
| addJumpProbs | Man page |
| allStatus | Man page |
| bam2ranges | Man page |
| changeCellTypesFormat | Man page |
| changeNBparamsFormat | Man page |
| changeRCformat | Man page |
| chrNumber | Man page |
| countAndNBfit_wrapperFunc | Man page |
| decodeStatus | Man page |
| dispersionPar | Man page |
| estimateP | Man page |
| estimateR | Man page |
| filt | Man page |
| genotype_class | Man page |
| getCNprob | Man page |
| getGenotypeProbDataFrame | Man page |
| getGenotypeProbTable | Man page |
| getGenotypeStatus | Man page |
| getNextState | Man page |
| getPossibleCNs | Man page |
| getSegReadCounts | Man page |
| getSegType | Man page |
| get_GT_class_prob_table | Man page |
| getlegend | Man page |
| initialState | Man page |
| jumpProbs | Man page |
| newSVcalling | Man page |
| newgetCellStatProbabilities | Man page |
| newgetGenotypeProbTable | Man page |
| nonzeroCovBins | Man page |
| normalizeProbTable | Man page |
| plotHeatmapSegment | Man page |
| readBams | Man page |
| regularizeProbTable | Man page |
| setPanelHeights | Man page |
| sisterHaplotype | Man page |
| uniqueMappableBins | Man page |
