uniqueMappableBins: Outputs the list of indices of the bins having the fraction...
In friendsofstrandseq/MaRyam: Genotyping Structural Variants from single-cell Strand-seq data.
Description
Usage
Arguments
Author(s)
Description
Outputs the list of indices of the bins having the fraction of low mapq reads less than alpha.
Usage
1
uniqueMappableBins(counts, unique.counts, alpha = 0.05)
Arguments
counts
A data.frame containing W and C read counts in some segments.
alpha
The coefficient of NB dispersion parameter for the number of background reads.
uniqe.counts
A data.frame containing W and C unique read counts in segments.
Author(s)
Maryam Ghareghani
friendsofstrandseq/MaRyam documentation built on May 28, 2019, 8:40 p.m.
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Description Usage Arguments Author(s)
Description
Outputs the list of indices of the bins having the fraction of low mapq reads less than alpha.
Usage
1 | uniqueMappableBins(counts, unique.counts, alpha = 0.05)
|
Arguments
counts |
A |
alpha |
The coefficient of NB dispersion parameter for the number of background reads. |
uniqe.counts |
A |
Author(s)
Maryam Ghareghani
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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