readMapHDF5: Read 'map' from an input HDF5 file.
In gact/shmootl: QTL Analysis Utilities for Yeast
Description
Usage
Arguments
Details
Value
See Also
Description
Read map from an input HDF5 file.
Usage
1
readMapHDF5(infile, name)
Arguments
infile
An input HDF5 file.
name
Map name.
Details
A mapframe dataset is read from the 'Maps' group at
the root of the HDF5 file, and converted to an R/qtl map object.
Value
An R/qtl map object. Returns NULL
if no map is found with the specified name.
See Also
Other HDF5 functions: readCrossHDF5,
readResultHDF5,
readResultsOverviewHDF5,
writeCrossHDF5, writeMapHDF5,
writeResultHDF5,
writeResultsOverviewHDF5
Other map utility functions: as.data.frame.mapframe,
as.data.frame.map,
as.mapframe, as.map,
extractMarkers,
extractPseudomarkers,
findFlanking, findLoci,
findMarkers, getMapSteps,
getMapUnit, gmapframe,
hasMapCSV, inMapOrder,
inferMapStep, mapframe,
mapsEqual, orderMap,
readMapCSV, readMapframeCSV,
setMapUnit, writeMapCSV,
writeMapHDF5,
writeMapframeCSV
gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value See Also
Description
Read map from an input HDF5 file.
Usage
1 | readMapHDF5(infile, name)
|
Arguments
infile |
An input HDF5 file. |
name |
Map name. |
Details
A mapframe dataset is read from the 'Maps' group at
the root of the HDF5 file, and converted to an R/qtl map object.
Value
An R/qtl map object. Returns NULL
if no map is found with the specified name.
See Also
Other HDF5 functions: readCrossHDF5,
readResultHDF5,
readResultsOverviewHDF5,
writeCrossHDF5, writeMapHDF5,
writeResultHDF5,
writeResultsOverviewHDF5
Other map utility functions: as.data.frame.mapframe,
as.data.frame.map,
as.mapframe, as.map,
extractMarkers,
extractPseudomarkers,
findFlanking, findLoci,
findMarkers, getMapSteps,
getMapUnit, gmapframe,
hasMapCSV, inMapOrder,
inferMapStep, mapframe,
mapsEqual, orderMap,
readMapCSV, readMapframeCSV,
setMapUnit, writeMapCSV,
writeMapHDF5,
writeMapframeCSV
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.