writeMapframeCSV: Write 'mapframe' to a CSV file.

In gact/shmootl: QTL Analysis Utilities for Yeast

Description

This function writes a yeast mapframe object to any R/qtl CSV file that can contain map data, whether it is a map table file, genotype file, or a full cross file. If an output genotype or cross file already exists, the mapframe is written to the map portion of the output file.

Usage

writeMapframeCSV(x, outfile, include.mapunit = TRUE)

Arguments

x	A mapframe object.
outfile	Output CSV file path.
include.mapunit	Include map unit information in output file.

See Also

Other CSV functions: hasMapCSV, readCovarCSV, readCrossCSV, readGenoCSV, readMapCSV, readMapframeCSV, readPhenoCSV, recodeCSV, sniffCSV, writeCrossCSV, writeGenoCSV, writeMapCSV, writePhenoCSV

Other map utility functions: as.data.frame.mapframe, as.data.frame.map, as.mapframe, as.map, extractMarkers, extractPseudomarkers, findFlanking, findLoci, findMarkers, getMapSteps, getMapUnit, gmapframe, hasMapCSV, inMapOrder, inferMapStep, mapframe, mapsEqual, orderMap, readMapCSV, readMapHDF5, readMapframeCSV, setMapUnit, writeMapCSV, writeMapHDF5

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.