writeMapHDF5: Write 'map' to an output HDF5 file.

In gact/shmootl: QTL Analysis Utilities for Yeast

Description

Write map to an output HDF5 file.

Usage

writeMapHDF5(map, outfile, name = NULL, overwrite = FALSE)

Arguments

map	An R/qtl map object.
outfile	An output HDF5 file.
name	Map name.
overwrite	Option indicating whether to force overwrite of an existing map. By default, existing maps cannot be overwritten.

Details

An R/qtl map object is written to the 'Maps' group at the root of the given HDF5 file. If no map name is specified, a default will be assigned based on whether it is a genetic or physical map.

See Also

Other HDF5 functions: readCrossHDF5, readMapHDF5, readResultHDF5, readResultsOverviewHDF5, writeCrossHDF5, writeResultHDF5, writeResultsOverviewHDF5

Other map utility functions: as.data.frame.mapframe, as.data.frame.map, as.mapframe, as.map, extractMarkers, extractPseudomarkers, findFlanking, findLoci, findMarkers, getMapSteps, getMapUnit, gmapframe, hasMapCSV, inMapOrder, inferMapStep, mapframe, mapsEqual, orderMap, readMapCSV, readMapHDF5, readMapframeCSV, setMapUnit, writeMapCSV, writeMapframeCSV

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.