hotspot: Position of hotspots throughout the human genome

Description Usage Format Details References

Description

These datasets are data frames containing position and intensity of hotspots in the human genome, for releases hg17 (build 35), hg18 (build 36) and hg19 (build 37). The hotspot for hg17 were downloaded from the HapMap ftp repository. They were converted to other builds (hg18, hg19) using hgLiftOver.

Usage

1

Format

Data frames with 32996 rows and 7 variables

Details

The variables are:

References

Hg17 hotspots: ftp://ftp.ncbi.nlm.nih.gov/hapmap/recombination/2006-10_rel21_phaseI+II/hotspots/hotspots.txt.gz

hgLiftOver: http://genome.ucsc.edu/cgi-bin/hgLiftOver


genostats/Fantasio documentation built on June 30, 2019, 2:25 a.m.