writeMSA: Write a multiple sequence alignment in a phylip like format....

In gschofl/DR2S: Dual redundant reference sequencing

Description

Write a multiple sequence alignment in a phylip like format. Formatted for easily accessing positions and differences

Usage

writeMSA(aln, file = "", block.width = 50)

Arguments

aln	The alignment as a DNAStringSet.
file	The filename and path.
block.width	The block width of the resulting alignment.

Examples

## Not run: 
library(Biostrings)
msa <- DNAStringSet(c("AAA", "AGA", ))
print("TODO: write rep seq example which runs")

## End(Not run)

gschofl/DR2S documentation built on May 17, 2019, 8:40 a.m.