plot_nnn: Plot the normalized nearest neighbor (called internally)

In gusef/IrisSpatialFeatures: A package to extract spatial features based on multiplex IF images

Description

Plot the normalized nearest neighbor (called internally)

Usage

plot_nnn(sub, markerA, markerB, reference, title, subtitle, legendtitle, order,
  font1, font2, microns_per_pixel)

## S4 method for signature 'tbl_df'
plot_nnn(sub, markerA, markerB, reference, title, subtitle,
  legendtitle, order = c(), font1 = 6, font2 = 4, microns_per_pixel = 1)

Arguments

sub	subset of data in a tibble
markerA	for factors
markerB	for factors
reference	for factors
title	top of plot
subtitle	on plot
legendtitle	title to put over legend
order	a vector of sample names to display from left to right, if not specified will order by factor
font1	font size 1
font2	font size 2
microns_per_pixel	scale data by this

Value

gg

gusef/IrisSpatialFeatures documentation built on May 6, 2019, 9:50 p.m.