mergeSCE: Merges a SingleCellExperiment object into the SCFind index

In hemberg-lab/scfind: A search tool for single cell RNA-seq data by gene lists

Merges a SingleCellExperiment object into the SCFind index

Description

It creates an SCFind for the individual assay and then invokes the mergeDataset method obeying the same semantic rules.

Usage

## S3 method for class 'dataset.from.sce'
merge(object, sce, dataset.name)

## S4 method for signature 'SCFind,SingleCellExperiment,character'
mergeSCE(object, sce,
  dataset.name)

Arguments

object	the root scfind object
sce	the SingleCellExperiment object to be merged
dataset.name	a dataset name for the assay

Value

the new object with the sce object merged

hemberg-lab/scfind documentation built on March 27, 2022, 8:56 p.m.