Files in ian-hastings/rotations
Simulating the Evolution of Insecticide Resistance under Rotations

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/array_named.r R/fitness_single_locus.r R/freq_fitness_simple.r R/genotype_freq.r R/gens_under_thresh.r R/get_one_in.r R/insecticide_check.r R/insecticide_switch.r R/migration_test.r R/mort_by_genotype.R R/mort_from_resist.r R/mutn_seln_bal.r R/plot_mort_thresh.r R/raf_get.r R/read_in_expt.r R/rot_migrate.r R/rot_plots.r R/rotations.r R/run_rot.r R/set_exposure_rot.r R/set_run_inputs.r R/set_start_freqs.r README.md data-raw/Rotations-simulation.R data-raw/rotations_doMPI_jam1.R data-raw/rotations_doParallel_jam1.R
inst/documents/df_res_all_rot.rda
inst/documents/df_res_all_rot1000-diffI-lowstart.rda
inst/documents/df_res_all_rot1400.rda
inst/documents/df_res_all_rot200.rda
inst/documents/df_res_all_rot2000.rda
inst/documents/figs/unnamed-chunk-10-1.tiff
inst/documents/figs/unnamed-chunk-11-1.tiff
inst/documents/figs/unnamed-chunk-12-1.tiff
inst/documents/figs/unnamed-chunk-13-1.tiff
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inst/documents/figs/unnamed-chunk-8-1.tiff
inst/documents/figs/unnamed-chunk-9-1.tiff
inst/documents/paper3/biomed-central.csl
inst/documents/paper3/df_res_all_rot10000.rda
inst/documents/paper3/df_res_all_rot_cost10000_mgs5.rda
inst/documents/paper3/df_res_all_rot_cost10000_mut_sel_bal.rda
inst/documents/paper3/df_res_all_rot_cost10000_no_freq_limit.rda
inst/documents/paper3/df_res_all_rot_cost_mig10000.rda
inst/documents/paper3/df_res_all_rot_mig1000.rda
inst/documents/paper3/df_res_all_rot_mig10000.rda
inst/documents/paper3/df_res_all_rot_nocost_nomig1000.rda
inst/documents/paper3/df_res_all_rot_nocost_nomig10000_mgs5.rda
inst/documents/paper3/library.bib
inst/documents/paper3/pap3_rot_analyses.Rmd
inst/documents/paper3/pap3figs/Fig1-1.tiff
inst/documents/paper3/pap3figs/Fig10-1.tiff
inst/documents/paper3/pap3figs/Fig2-1.tiff
inst/documents/paper3/pap3figs/Fig3-1.tiff
inst/documents/paper3/pap3figs/Fig4-1.tiff
inst/documents/paper3/pap3figs/Fig5-1.tiff
inst/documents/paper3/pap3figs/Fig5xtra-1.tiff
inst/documents/paper3/pap3figs/Fig5xtra_cost_dispersal-1.tiff
inst/documents/paper3/pap3figs/Fig6-1.tiff
inst/documents/paper3/pap3figs/Fig7-1.tiff
inst/documents/paper3/pap3figs/Fig8-1.tiff
inst/documents/paper3/pap3figs/Fig8.2-1.tiff
inst/documents/paper3/pap3figs/Fig9-1.tiff
inst/documents/paper3/pap3figs/FigX-1.tiff
inst/documents/paper3/pap3figs/FigX8-1.tiff
inst/documents/paper3/paper3_rotations.Rmd
inst/documents/paper3/paper3_rotations.docx
inst/documents/paper3/paper3_rotations20180501.docx
inst/documents/paper3/paper3_rotations20180514.docx
inst/documents/paper3/recent_resist_literature.Rmd
inst/documents/paper3/recent_resist_literature.docx
inst/documents/paper3/rotations_model_progress_lstm_201810.docx
inst/documents/phaps-rotations-better.Rmd
inst/documents/rot_plot.png
inst/documents/rot_plot2.png
inst/documents/rotation_runs2019.Rmd inst/documents/rotations1.Rmd inst/documents/rotations1.pdf inst/documents/rotations_notes.Rmd inst/documents/rotations_story.Rmd inst/documents/rotations_story.pdf inst/documents/sensi_an_param_call_list.Rmd inst/documents/sensi_an_rotations1.Rmd inst/documents/sensi_an_rotations201911.Rmd inst/documents/sensi_an_rotations_trimmed_4_jim.r inst/documents/test-plot-resize.Rmd
inst/documents/test-plot-resize.docx
inst/documents/test-resize1-1.tiff
inst/documents/test-resize2-1.tiff
inst/extdata/_in_expt_rotations_default.csv
inst/extdata/_in_expt_rotations_default_one_scenario.csv
inst/extdata/expt-A2-freq-insame-costs-nodisp.csv
inst/extdata/rotations-paper-inputs-201910.xlsx
inst/shiny/resistrot/about.md
inst/shiny/resistrot/rsconnect/shinyapps.io/andysouth/resistrot.dcf
inst/shiny/resistrot/server.r inst/shiny/resistrot/ui.r
inst/shiny/resistrot/www/bootstrap_simplex.css
inst/shiny/rotresist1/about.md
inst/shiny/rotresist1/rsconnect/shinyapps.io/andysouth/.gitignore
inst/shiny/rotresist1/server.r inst/shiny/rotresist1/ui.r
inst/shiny/rotresist1/www/bootstrap_simplex.css
man/array_named.Rd man/fitness_single_locus.Rd man/fitness_single_locus_test.Rd man/insecticide_check.Rd man/insecticide_switch.Rd man/migration_test.Rd man/raf_get.Rd man/rot_migrate.Rd man/rot_plot_resistance.Rd man/rotations.Rd man/run_rot.Rd man/set_exposure_rot.Rd man/set_exposure_rot_test.Rd man/set_start_freqs.Rd man/set_start_freqs_test.Rd
para1results.csv
rot.csv
rotations.Rproj
seq.csv
tests/testthat.R tests/testthat/test_rot_migrate.r
ian-hastings/rotations documentation built on Nov. 15, 2019, 2:44 p.m.