set_exposure_rot: set exposure to insecticides for rotations to a flexible...

In ian-hastings/rotations: Simulating the Evolution of Insecticide Resistance under Rotations

Description

TODO could this be made generic to the resistance code too ? I suspect not. They do things quite differently. This just needs 1 insecticide at a time, so is : array_named(insecticide=1:n_insecticides, sex=c('m','f'), exposure=c('no','lo','hi') In resistance it is : array_named( sex=c('m','f'), niche1=c('0','a','A'), niche2=c('0','b','B') )

Usage

set_exposure_rot(
  n_insecticides = NULL,
  expo_hi = 0.8,
  expo_lo = 0,
  male_expo_prop = 1,
  plot = FALSE
)

Arguments

n_insecticides	number of insecticides, optional can just be specified by number of items in vector expo
expo_hi	exposure to insecticide in hi niche, either single or vector of 1 per insecticide
expo_lo	exposure to insecticide in lo niche, either single or vector of 1 per insecticide
male_expo_prop	proportion tht males are exposed relative to f, default 1, likely to be <1 (could possibly be a vector per insecticide)
plot	whether to plot exposure

Details

fills an array of exposure values

Value

array of exposure values for the different insecticides

Examples

a_exp <- set_exposure_rot( expo_hi=0.9 )
a_exp <- set_exposure_rot( expo_hi=c(0.5,0.9), male_expo_prop = 0.9)

#allowing array to be viewed differently
as.data.frame(a_exp)

ian-hastings/rotations documentation built on Dec. 14, 2020, 11:42 p.m.