EGAhtsgetResourceResolver: EGA htsget resource resolver

In isglobal-brge/dsOmics: DataSHIELD server site Omic functions

EGA htsget resource resolver

Description

Build a EGA htsget resource client from a resource object describing access to a EGA valid credentials, pointing to a VCF or BAM file to be converted into a GDS file.

Format

A R6 object of class EGAhtsgetResourceResolver

Super class

resourcer::ResourceResolver -> EGAhtsgetResourceResolver

Methods

Public methods

• EGAhtsgetResourceResolver$isFor()

• EGAhtsgetResourceResolver$newClient()

• EGAhtsgetResourceResolver$clone()

Inherited methods

• resourcer::ResourceResolver$initialize()

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Method isFor()

Usage

EGAhtsgetResourceResolver$isFor(x)

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Method newClient()

Usage

EGAhtsgetResourceResolver$newClient(x)

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Method clone()

The objects of this class are cloneable with this method.

Usage

EGAhtsgetResourceResolver$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

isglobal-brge/dsOmics documentation built on March 22, 2023, 4:01 a.m.