PCASNPSDS: Principal Component Analysis (PCA) on SNP genotype data
In isglobal-brge/dsOmics: DataSHIELD server site Omic functions
PCASNPSDS R Documentation
Principal Component Analysis (PCA) on SNP genotype data
Description
Principal Component Analysis (PCA) on SNP genotype data
Usage
PCASNPSDS(gds, prune, ld.threshold)
Arguments
gds
GDS object
prune
bool TRUE to prune the GDS file using SNPRelate::snpgdsLDpruning
ld.threshold
Threshold for the pruning (see snpgdsLDpruning)
Value
data frame with the IDs and principal component points to be plotted.
isglobal-brge/dsOmics documentation built on Nov. 6, 2024, 1:28 a.m.
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| PCASNPSDS | R Documentation |
Principal Component Analysis (PCA) on SNP genotype data
Description
Principal Component Analysis (PCA) on SNP genotype data
Usage
PCASNPSDS(gds, prune, ld.threshold)
Arguments
gds |
|
prune |
|
ld.threshold |
Threshold for the pruning (see |
Value
data frame with the IDs and principal component points to be plotted.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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