Files in jeffkimbrel/jakR
jakR Miscellaneous Scripts
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/data.R
R/drep_extract.R
R/expand_named_palette.R
R/fastq_summary.R
R/format_dt.R
R/getAlphaDiversity.R
R/getPhyloDiversity.R
R/getSig.R
R/get_fts_intervals.R
R/get_phylo_palette.R
R/gt_helper.R
R/jak_theme.R
R/orthofinder.R
R/pairwiseAdonis.R
R/palette_jak.R
R/permanova.R
R/phylo_other.R
R/plotDistances.R
R/plotPD.R
R/plot_fts_intervals.R
R/plot_fts_points.R
R/run_fts.R
R/seqtab_stats.R
R/showColorPalette.R
R/sigCombine.R
R/summarySE.R
R/zeroOTU.R
README.md
_pkgdown.yml
data-raw/jak_palettes.R
data/jak_palettes.rda
inst/rmarkdown/templates/jakr/skeleton/skeleton.Rmd
inst/rmarkdown/templates/jakr/template.yaml
inst/rmarkdown/templates/obsidian/skeleton/skeleton.Rmd
inst/rmarkdown/templates/obsidian/template.yaml
inst/rmarkdown/templates/obsidian_embed/skeleton/skeleton.Rmd
inst/rmarkdown/templates/obsidian_embed/template.yaml
jakR.Rproj
man/.Rapp.history
man/all_are_valid_colors.Rd
man/drep_extract.Rd
man/expand_named_palette.Rd
man/fastq_filter_summary_amplicon.Rd
man/fastq_filter_summary_meta.Rd
man/fastq_info_summary.Rd
man/format_dt.Rd
man/getAlphaDiversity.Rd
man/getPhyloDiversity.Rd
man/getSig.Rd
man/get_alpha_diversity.Rd
man/get_fts_intervals.Rd
man/get_phylo_diversity.Rd
man/get_phylo_palette.Rd
man/gt_theme.Rd
man/jak_palettes.Rd
man/jak_theme.Rd
man/jak_theme_black.Rd
man/orthofinder_complete_clusters.Rd
man/orthofinder_summary.Rd
man/pairwiseAdonis.Rd
man/palette_jak.Rd
man/permanova.Rd
man/phylo_other.Rd
man/plotDistances.Rd
man/plotPD.Rd
man/plot_distances.Rd
man/plot_fts_intervals.Rd
man/plot_fts_points.Rd
man/run_fts.Rd
man/seqtab_stats.Rd
man/show_all_color_palettes.Rd
man/show_color_palette.Rd
man/sigCombine.Rd
man/summarySE.Rd
man/zeroOTU.Rd
