get_phylo_diversity: Phylogenetic Diversity Measures

View source: R/getPhyloDiversity.R

get_phylo_diversityR Documentation

Phylogenetic Diversity Measures

Description

Phylogenetic Diversity Measures

Usage

get_phylo_diversity(p, runs = 999, null.model = "frequency", minOccurrence = 1)

Arguments

p

A phyloseq object

runs

Number of bootstraps to run

null.model

The null.model for the SES calculations

minOccurrence

Species must be found at least this many times in at least one sample to be kept


jeffkimbrel/jakR documentation built on March 26, 2024, 3:18 a.m.