gene_variation: Per gene variance component model

In jhsiao999/ashbun: Methods and evaluation tools for single cell RNA-seq count data

Description

Wrapper of the blmer function. Fits a bayesian nested model for one gene at a time.

Usage

gene_variation(counts, annotation)

Arguments

annotation	Meta-data matrix of each column of xx.
xx	Matrix of expression measurements on log scale.

Examples

molecules_final <- get(load("molecules-final.txt"))
anno_filter <- get(load("annotation-filter.txt"))
blme_final <- gene_variation(counts = molecules_final,
                             annotation = anno_filter)

jhsiao999/ashbun documentation built on May 8, 2019, 11:17 p.m.