Description Usage Arguments Value Author(s)
Implement DESeq2.
1 2 3 |
counts |
Gene by sample expression count matrix (G by N). |
condition |
Binary vector of length N indicating sample biological condition. |
libsize_factors |
Numeric vector of scale factors for library sizes. Default NULL computes libsize_factors using DESeq2. |
control |
A list with control arguments, including
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List with the following objects
betahat
Estimate effect size of condition for all genes.
sebetahat
Standard errors of the effect sizes.
pvalue
P-values of the effect sizes.
fit
DESeq2 complete output of the model fit. NULL if save_modelFit = FALSE
.
Chiaowen Joyce Hsiao
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