add_pseudotime: add pseudotime in monocle object to the metadata of the...
In jiang-junyao/IReNA: IReNA
add_pseudotime R Documentation
add pseudotime in monocle object to the metadata of the seurat object
Description
add pseudotime in monocle object to the metadata of the seurat object
Usage
add_pseudotime(seurat_object, monocle_object)
Arguments
seurat_object
seurat object, which has same cells and genes as monocle_object
monocle_object
monocle object, which include pesudotime and has same
cells and genes as seurat_object
Value
seurat_object with pseudotime
Examples
load(system.file("extdata", "test_seurat.rda", package = "IReNA"))
monocle_object = get_pseudotime(test_seurat)
add_pseudotime(seurat_object = test_seurat,monocle_object = monocle_object)
jiang-junyao/IReNA documentation built on May 2, 2024, 6:54 a.m.
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| add_pseudotime | R Documentation |
add pseudotime in monocle object to the metadata of the seurat object
Description
add pseudotime in monocle object to the metadata of the seurat object
Usage
add_pseudotime(seurat_object, monocle_object)
Arguments
seurat_object |
seurat object, which has same cells and genes as monocle_object |
monocle_object |
monocle object, which include pesudotime and has same cells and genes as seurat_object |
Value
seurat_object with pseudotime
Examples
load(system.file("extdata", "test_seurat.rda", package = "IReNA"))
monocle_object = get_pseudotime(test_seurat)
add_pseudotime(seurat_object = test_seurat,monocle_object = monocle_object)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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