View source: R/reconstruct_network.R
sort_TFs_degree | R Documentation |
Sort Transcription factor based on degree.
sort_TFs_degree(regulatory_relationships)
regulatory_relationships |
regulatory relationships , columns should contain 'TF', 'TFSymbol', 'TFGroup', 'Target', 'TargetSymbol', 'TargetGroup' and 'Correlation' |
Matrix contains sorted transcription factors
load(system.file("extdata", "test_clustering.rda", package = "IReNA"))
test_clustering=add_ENSID(test_clustering,Spec1 = 'Hs')
correlation <- get_cor(test_clustering, Tranfac201803_Hs_MotifTFsF, 0.7, start_column=3)
TFs_degree <- sort_TFs_degree(correlation)
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