tests/runTests.R

In jianhong/InPAS: Identify Novel Alternative PolyAdenylation Sites (PAS) from RNA-seq data

pkgs_required <- c(
  "BSgenome.Mmusculus.UCSC.mm10",
  "TxDb.Mmusculus.UCSC.mm10.knownGene",
  "EnsDb.Mmusculus.v79",
  "rtracklayer",
  "GenomicRanges",
  "RUnit",
  "limma", "future.apply"
)
for (pkg in pkgs_required)
{
  require(pkg, character.only = TRUE) || stop(pkg, " can't be loaded!")
}

BiocGenerics:::testPackage("InPAS")