getGC.hg19: GC content computation for specific bins
In jmonlong/PopSV: Population-based detection of structural variants from Read-Depth signal
Description
Usage
Arguments
Value
Author(s)
Description
Add a column with GC content to a data.frame with 'chr', 'start' and 'end' column.
Requires BSgenome for Hsapiens hg19; if not instructions to install it will
be displayed.
Usage
1
getGC.hg19(bins.df)
Arguments
bins.df
a data.frame with bin information. Columns 'chr', 'start' and 'end'
are required.
Value
the same input data.frame with an extra column 'GCcontent'.
Author(s)
Jean Monlong
jmonlong/PopSV documentation built on Sept. 15, 2019, 9:29 p.m.
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Description Usage Arguments Value Author(s)
Description
Add a column with GC content to a data.frame with 'chr', 'start' and 'end' column. Requires BSgenome for Hsapiens hg19; if not instructions to install it will be displayed.
Usage
1 | getGC.hg19(bins.df)
|
Arguments
bins.df |
a data.frame with bin information. Columns 'chr', 'start' and 'end' are required. |
Value
the same input data.frame with an extra column 'GCcontent'.
Author(s)
Jean Monlong
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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