mergeConsBin.simple: Simple merge of abnormal bins
In jmonlong/PopSV: Population-based detection of structural variants from Read-Depth signal
Description
Usage
Arguments
Value
Author(s)
View source: R/mergeConsBin.simple.R
Description
Merge consecutive bins (end1+1->start2).
Usage
1
mergeConsBin.simple(res.df, col.mean = c("z", "pv", "qv", "fc"))
Arguments
res.df
a data.frame with the Z-scores. Columns 'chr', 'start', 'end' and 'z'
are required.
col.mean
a list of potential columns for which the mean value should be kept
when merging bins.
Value
a data.frame similar to the input 'res.df' but with an extra 'nbBinCons'
column (the number of bin merged for each event).
Author(s)
Jean Monlong
jmonlong/PopSV documentation built on Sept. 15, 2019, 9:29 p.m.
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Description Usage Arguments Value Author(s)
View source: R/mergeConsBin.simple.R
Description
Merge consecutive bins (end1+1->start2).
Usage
1 | mergeConsBin.simple(res.df, col.mean = c("z", "pv", "qv", "fc"))
|
Arguments
res.df |
a data.frame with the Z-scores. Columns 'chr', 'start', 'end' and 'z' are required. |
col.mean |
a list of potential columns for which the mean value should be kept when merging bins. |
Value
a data.frame similar to the input 'res.df' but with an extra 'nbBinCons' column (the number of bin merged for each event).
Author(s)
Jean Monlong
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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