plot_perregion: Recall, precision, F1 per region

In jmonlong/sveval: SV evaluation

Recall, precision, F1 per region

Description

Recall, precision, F1 per region

Usage

plot_perregion(eval, regions.gr, min.region.ol = 0.5, plot = TRUE)

Arguments

eval	the output of svevalOl.
regions.gr	GRanges object with regions of interest
min.region.ol	minimum proportion of variant that must overlap regions.gr. Default is 0.5
plot	should the function return the plot list. Default is TRUE. If FALSE, returns a data.frame.

Value

a list of ggplot objects if plot=TRUE (default); a data.frame otherwise.

Author(s)

Jean Monlong

jmonlong/sveval documentation built on July 31, 2023, 7:50 p.m.