API for jonalim/mfBiclust
Pipelines for Bi-Clustering Using Matrix Factorization

Global functions
BiclusterExperiment Man page
BiclusterExperiment,ANY-method Man page
BiclusterExperiment,matrix-method Man page
BiclusterExperiment-class Man page
BiclusterStrategy-class Man page
addStrat Man page
addStrat,BiclusterExperiment,numeric-method Man page
als_nmf Man page Source code
as.matrix,BiclusterExperiment-method Man page
auto_bcv Man page Source code
bcNames Man page
bcNames,BiclusterStrategy-method Man page
bcv Man page Source code
bcvGivenKs Source code
biclust2genericFit Source code
bicluster-methods Man page
biclusterGUI Man page
biclusterGUI,ANY-method Man page
biclusterGUI,BiclusterExperiment-method Man page
biclusterGUI,ExpressionSet-method Man page
biclusterGUI,missing-method Man page
biclusterMatrix2List Man page Source code
biclusterNumbers2membershipMatrices Man page Source code
cancer_benchmark Man page
clean Man page
clean,BiclusterExperiment-method Man page
clusteredFeatures Man page
clusteredFeatures,BiclusterStrategy-method Man page
clusteredSamples Man page
clusteredSamples,BiclusterStrategy-method Man page
createAnnots Source code
duplicable Source code
factorHeatmap Man page
factorHeatmap,BiclusterExperiment,BiclusterStrategy-method Man page
factorHeatmap,BiclusterExperiment,character-method Man page
factorHeatmap,BiclusterExperiment,numeric-method Man page
featureFactor Man page
featureFactor,BiclusterStrategy-method Man page
featureThresh Man page
featureThresh,BiclusterStrategy-method Man page
filter.biclust Man page Source code
genSimData Man page Source code
genSimDataHelper Source code
genericFactorization-class Man page
genericFit-class Man page
getStrat Man page
getStrat,BiclusterExperiment-method Man page
hyperGGO Source code
is.wholenumber Source code
kLimiter Source code
logicalMatrix2Numeric Source code
matrixHeatmap Man page Source code
method Man page
method,BiclusterStrategy-method Man page
mfBiclust Man page
mfBiclust-package Man page
name Man page
name,BiclusterStrategy-method Man page
name,list-method Man page
names,BiclusterExperiment-method Man page
nclust Man page
nclust,BiclusterStrategy-method Man page
nipals_pca Man page Source code
nipals_pca_nocatch Source code
otsuHelper Man page Source code
overlap Man page Source code
plaid Source code
plot Man page
plot,BiclusterExperiment,ANY-method Man page
plotDist Man page
plotDist,BiclusterExperiment-method Man page
plotThreshold Man page
plotThreshold,BiclusterExperiment,BiclusterStrategy-method Man page
plotThreshold,BiclusterExperiment,character-method Man page
plotThreshold,BiclusterExperiment,numeric-method Man page
pseudovalues Source code
sampleFactor Man page
sampleFactor,BiclusterStrategy-method Man page
sampleThresh Man page
sampleThresh,BiclusterStrategy-method Man page
simdata Man page
sizes Man page Source code
snmf Source code
spectral Source code
strategies Man page
strategies,BiclusterExperiment-method Man page
svd_pca Man page Source code
testFE Source code
threshAlgo Man page
threshAlgo,BiclusterStrategy-method Man page
threshold Man page
threshold,matrix,numeric-method Man page
thresholdHelper Source code
union.biclust Man page Source code
validBiclusterExperiment Source code
validBiclusterStrategy Source code
validateBiclustNames Source code
validateK Source code
validateKM Source code
validateKs Source code
validatePhenoNames Source code
validateStratName Source code
wipe Man page
wipe,BiclusterExperiment-method Man page
wipeExcept Man page
wipeExcept,BiclusterExperiment-method Man page
yeast_benchmark Man page
jonalim/mfBiclust documentation built on Jan. 17, 2019, 7:04 a.m.