bcNames: Names of biclusters in this BiclusterStrategy

Description Usage Arguments Value Examples

Description

Returns a character vector of bicluster names, which can be used to reference columns of featureFactor(bcs) and clusteredFeatures(bcs), and rows of sampleFactor(bcs) and codeclusteredSamples(bcs). Mostly useful for graphical functions.

Usage

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bcNames(bcs, allBc = FALSE)

Arguments

bcs

A BiclusterStrategy

allBc

TRUE to return data from all stored biclusters

Value

A character vector.

Examples

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bce <- BiclusterExperiment(yeast_benchmark[[1]])
bce <- addStrat(bce, k = 2, method = "als-nmf")
bcs <- getStrat(bce, 1)
bcNames(bcs)

jonalim/mfBiclust documentation built on May 4, 2019, 4:13 a.m.