Man pages for jvwong/emRNASeq
Utilities for RNA sequencing analysis

create_metaCreate a data frame housing the RNA-seq metadata
de_test_rseqPerform a pair-wise differential expression test on RNA-seq...
emRNASeqemRNASeq: A package for pathways analysis of RNA sequencing...
filter_rseqFilter RNA-seq data for minimumnumber of counts in a class
format_class_gseaGenerate categorical class text file content
format_expression_gseaGenerate an expression text file content
format_ranks_gseaGenerate text file content for genes ranked by a funtion of...
get_gene_modelRetrieve the gene info
helloHello, World!
integrate_classesIntegrate the sample class assignments
map_namesNormalize the data.frame nameswith those on a 'GRanges'...
merge_dataMerge a set of files representing RNA sequencing gene counts
normalize_rseqThink wrapper for RNASeq normalization package of choice...
plot_deAn M vs. A plot that highlights differentially expressed...
retrieve_gdc_rnaseqGet TCGA RNAseq data from GDC
jvwong/emRNASeq documentation built on May 18, 2017, 2:06 p.m.