get_gene_model: Retrieve the gene info
In jvwong/emRNASeq: Utilities for RNA sequencing analysis
Description
Usage
Arguments
Value
Description
This requires that either the mgi_id for mouse or ensembl gene id for human are used.
This is tough to enforce so must fail elegantly. Thus returns a row
Usage
1
get_gene_model(data_df, species, source_name, target_name)
Arguments
data_df
the data frame of genes (rownames) and samples (colnames)
species
the species (mouse, human)
source_name
attribute (gene namespace) input
target_name
attribute (gene namespace) desired
Value
A GRanges having unique and valid target_name entries
jvwong/emRNASeq documentation built on May 20, 2019, 5:21 a.m.
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Description Usage Arguments Value
Description
This requires that either the mgi_id for mouse or ensembl gene id for human are used. This is tough to enforce so must fail elegantly. Thus returns a row
Usage
1 | get_gene_model(data_df, species, source_name, target_name)
|
Arguments
data_df |
the data frame of genes (rownames) and samples (colnames) |
species |
the species (mouse, human) |
source_name |
attribute (gene namespace) input |
target_name |
attribute (gene namespace) desired |
Value
A GRanges having unique and valid target_name entries
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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