Takes in an topTags
and DGEList
objects and the classes that are being compared and uses the plotSmear
to display the differentially expressed genes.
1 | plot_de(filtered_dge, de_tested_tt, baseline, test, threshold = 0.05)
|
filtered_dge |
A |
de_tested_tt |
A |
baseline |
character array for the 'baseline' class |
test |
character array for the 'test' class. |
threshold |
the maximum value of FDR (q-value) for a gene to be considered differentially expressed |
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