Description Usage Arguments Value
Takes in a DGEList
containing (normalized) RNA-seq data, performs a fit using estimateCommonDisp
and estimateTagwiseDisp
, a differential expression test via exactTest
and multiple-testing correction using Benjamini-Hochberge method in topTags
.
1 | de_test_rseq(normalized_dge, baseline, test)
|
normalized_dge |
A |
baseline |
character for the 'baseline' class |
test |
character for the 'test' class. DE testing will be performed relative to |
the fitted and adjusted TopTags
object
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