Description Usage Arguments Value
Takes in a SummarizedExperiment
object containing RNA-seq data and filters for low counts (> 1 cpm in a minimum number of samples equal to the smallest group size)
1 | filter_rseq(se, baseline, test, min_counts = 1)
|
se |
A |
baseline |
character for the 'baseline' class |
test |
character for the 'test' class. DE testing will be performed relative to |
min_counts |
The minimum threshold in counts per million for each sample |
a filtered DGEList
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