plotWTCtrl: Draw WT frequency plot comparing distribution of marginal...

In jweile/tileseqMave: TileSeq MAVE Analysis pipeline

Draw WT frequency plot comparing distribution of marginal frequencies in nonselect condition against WT condition

Description

Draw WT frequency plot comparing distribution of marginal frequencies in nonselect condition against WT condition

Usage

plotWTCtrl(
  info,
  params,
  marginalTiles,
  wtMarginalMeans,
  nsMarginalMeans,
  pseudoCount
)

Arguments

info	list containing details on condition (nscond), timepoint (tp), pdftag and outdir
params	parameter sheet object
marginalTiles	table with tile assignments for each entry in marginal counts table
wtMarginalMeans	table with mean marginal frequency across technical replicates in WT condition
nsMarginalMeans	table with mean marginal frequency across technical replicates in nonselect condition
pseudoCount	a small number added to each frequency to allow for log-scale visualization

jweile/tileseqMave documentation built on April 5, 2024, 4:51 p.m.