regionCensus: Perform census on overall region to determine what mutations...

In jweile/tileseqMave: TileSeq MAVE Analysis pipeline

Perform census on overall region to determine what mutations are present

Description

Perform census on overall region to determine what mutations are present

Usage

regionCensus(ri, tilesPerRegion, tileCensi, tileLambdas, maxChanges, tagger)

Arguments

ri	region index; region being analyzed
tilesPerRegion	a list of vectors containing the tile IDs for each region 'ri'
tileCensi	table containing population breakdown of variant types within each tile
tileLambdas	average number of mutations in each tile
maxChanges	maximum number of mutations allowed on x-axis of plot
tagger	list that contains functions for adding tags to page margins

Value

table containing population breakdown of variant types within region

jweile/tileseqMave documentation built on April 5, 2024, 4:51 p.m.