clusteredOntologyDotplot: Performs ontology clustering by genes and then shows medoids...

In kharchenkolab/cacoa: Case-Control Analysis Tools for Single-Cell RNA-Seq

Performs ontology clustering by genes and then shows medoids of the clusters with enrichplot::dotplot

Description

Performs ontology clustering by genes and then shows medoids of the clusters with enrichplot::dotplot

Usage

clusteredOntologyDotplot(
  ont.res,
  p.adj = 0.05,
  min.genes = 1,
  cut.h = 0.66,
  top.n = Inf,
  ...
)

Arguments

ont.res	something
p.adj	numeric Adjusted p-value set (default=0.05)
min.genes	integer Minimal number of genes (default=1)
cut.h	numeric (default=0.66)
top.n	integer Number of enriched terms to display (default=Inf). If Inf, no limit is set.
...	additional parameters passed to enrichplot::dotplot()

Value

enrichplot::dotplot showing medoids of gene clustering

kharchenkolab/cacoa documentation built on Nov. 8, 2024, 6:06 a.m.