generate_innate_params: Generate baseline abundances and cooperative/competitive...

Description Usage Arguments Value

View source: R/gLV_simulations.R

Description

Generate baseline abundances and cooperative/competitive parameters for use a generalized stochastic Lotka-Volterra This code is adapted directly from Tredennick et al. (2017)

Usage

1
generate_innate_params(S, start_time, end_time, PhiE, almean)

Arguments

S

number of species to simulate

start_time

time point at which to begin "recording" the series (previous time points will be discarded as burn-in)

end_time

full length of series to simulate (including burn-in)

PhiE

value from -1 to 1 defining average "synchrony" of species in the system; -1 indicates strong asynchrony, 1 indicates strong synchrony, and 0, neutrality

almean

value from -1 to 1 defining average competition or cooperation of species in the system; I believe -1.0 indicates strong cooperation, 1.0 indicates strong competition

Value

named list of parameters


kimberlyroche/ROL documentation built on Dec. 10, 2020, 2:18 a.m.