load_MAP_estimates: Load MAP estimates of microbial covariances from fitted...

In kimberlyroche/ROL: What the package does (short line)

Description

Load MAP estimates of microbial covariances from fitted models at the desired taxonomic level

Usage

load_MAP_estimates(tax_level = "ASV", DLM = FALSE, logratio = "alr")

Arguments

tax_level	taxonomic level at which to agglomerate data
DLM	if TRUE, looks for DLM model fits instead of GP model fits
logratio	logratio representation to use (e.g. "alr", "ilr", "clr")

Value

list of MAP covariance estimates indexed by host short name

Examples

Sigmas <- load_MAP_estimates(tax_level = "ASV", logratio = "alr")

kimberlyroche/ROL documentation built on Dec. 10, 2020, 2:18 a.m.