get_taxonomy: Get taxonomy, reordered to reflect altered ALR reference

Description Usage Arguments Value Examples

View source: R/data_parsing.R

Description

Get taxonomy, reordered to reflect altered ALR reference

Usage

1
get_taxonomy(data, alr_ref)

Arguments

data

a phyloseq object

alr_ref

index of ALR reference taxon

Value

data.frame of re-ordered taxonomy

Examples

1
tax <- get_taxonomy(data, alr_ref=67)

kimberlyroche/ROL documentation built on Dec. 10, 2020, 2:18 a.m.