build_between_within_distributions: Sample to construct between- and within-host distributions of...

In kimberlyroche/rulesoflife:

Sample to construct between- and within-host distributions of correlation for a given pair of taxa. The "within" distribution characterizes correlation of a pair of taxa within selected hosts; the "between" distribution characterizes the correlation of a given taxon with its own series across a samples of hosts.

Description

Sample to construct between- and within-host distributions of correlation for a given pair of taxa. The "within" distribution characterizes correlation of a pair of taxa within selected hosts; the "between" distribution characterizes the correlation of a given taxon with its own series across a samples of hosts.

Usage

build_between_within_distributions(
  pair,
  coord1,
  coord2,
  predictions,
  selected_hosts,
  verbose = TRUE
)

Arguments

pair	index of taxon pair
coord1	index of taxon 1
coord2	index of taxon 2
predictions	predictions data.frame subsetted to the taxa of interest
selected_hosts	subset of full host short name list to use
verbose	if TRUE, prints status comments

Value

data.frame of between- and within- correlation distribution samples

kimberlyroche/rulesoflife documentation built on May 7, 2023, 11:08 a.m.