downsample_counts: Simulate count data from the generative model, downsampling...
In kimberlyroche/rulesoflife:
downsample_counts R Documentation
Simulate count data from the generative model, downsampling it repeatedly,
and estimate the CLR correlation across taxa. Score the fidelity of estimates
on this downsampled data by calculating the proportion of taxon-taxon
correlations matched for sign.
Description
Simulate count data from the generative model, downsampling it repeatedly,
and estimate the CLR correlation across taxa. Score the fidelity of estimates
on this downsampled data by calculating the proportion of taxon-taxon
correlations matched for sign.
Usage
downsample_counts(sample_no = c(10, 20, 30, 40, 50, 75, 100, 200))
Arguments
sample_no
vector of sample counts; simulated data will be iteratively
downsampled to these sample counts
kimberlyroche/rulesoflife documentation built on May 7, 2023, 11:08 a.m.
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| downsample_counts | R Documentation |
Simulate count data from the generative model, downsampling it repeatedly, and estimate the CLR correlation across taxa. Score the fidelity of estimates on this downsampled data by calculating the proportion of taxon-taxon correlations matched for sign.
Description
Simulate count data from the generative model, downsampling it repeatedly, and estimate the CLR correlation across taxa. Score the fidelity of estimates on this downsampled data by calculating the proportion of taxon-taxon correlations matched for sign.
Usage
downsample_counts(sample_no = c(10, 20, 30, 40, 50, 75, 100, 200))
Arguments
sample_no |
vector of sample counts; simulated data will be iteratively downsampled to these sample counts |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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