generate_innate_params: Generate baseline abundances and cooperative/competitive...

In kimberlyroche/rulesoflife:

Generate baseline abundances and cooperative/competitive parameters for use a generalized stochastic Lotka-Volterra This code is adapted directly from Tredennick et al. (2017)

Description

Generate baseline abundances and cooperative/competitive parameters for use a generalized stochastic Lotka-Volterra This code is adapted directly from Tredennick et al. (2017)

Usage

generate_innate_params(S, start_time, end_time, PhiE, almean)

Arguments

S	number of species to simulate
start_time	time point at which to begin "recording" the series (previous time points will be discarded as burn-in)
end_time	full length of series to simulate (including burn-in)
PhiE	value from -1 to 1 defining average "synchrony" of species in the system; -1 indicates strong asynchrony, 1 indicates strong synchrony, and 0, neutrality
almean	value from -1 to 1 defining average competition or cooperation of species in the system; I believe -1.0 indicates strong cooperation, 1.0 indicates strong competition

Value

named list of parameters

kimberlyroche/rulesoflife documentation built on May 7, 2023, 11:08 a.m.