filter_joint_zeros: Return a vector indicating whether the frequency of 0-0...
In kimberlyroche/rulesoflife:
filter_joint_zeros R Documentation
Return a vector indicating whether the frequency of 0-0 observations for a
given taxon pair is less than some threshold
Description
Return a vector indicating whether the frequency of 0-0 observations for a
given taxon pair is less than some threshold
Usage
filter_joint_zeros(counts, threshold_and = 0.05, threshold_or = 0.5)
Arguments
counts
taxon-by-sample count matrix
threshold_and
ceiling on the proportion of allowable joint zero (0-0)
observations for a given pair of taxa
threshold_or
ceiling on the proportion of allowable combined zero and
non-zero observations for a given pair of taxa
Value
logical vector
kimberlyroche/rulesoflife documentation built on May 7, 2023, 11:08 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| filter_joint_zeros | R Documentation |
Return a vector indicating whether the frequency of 0-0 observations for a given taxon pair is less than some threshold
Description
Return a vector indicating whether the frequency of 0-0 observations for a given taxon pair is less than some threshold
Usage
filter_joint_zeros(counts, threshold_and = 0.05, threshold_or = 0.5)
Arguments
counts |
taxon-by-sample count matrix |
threshold_and |
ceiling on the proportion of allowable joint zero (0-0) observations for a given pair of taxa |
threshold_or |
ceiling on the proportion of allowable combined zero and non-zero observations for a given pair of taxa |
Value
logical vector
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.