get_Gamma | R Documentation |
Define a kernel (function) over samples
get_Gamma(
kernel_scale,
diet_weight,
min_correlation = 0.1,
days_to_min_autocorrelation = 90
)
kernel_scale |
total variance for the composite kernel |
diet_weight |
relative contribution of first three diet PCs to covariance across samples |
rho |
bandwidth for SE kernel |
Composite kernel is built from (1) squared exponential kernel (base autocorrelation component) and (2) seasonal kernel (periodic)
list containing kernel function and bandwidth parameter
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