attriColorGene: Attribute Color to Gene

In kmezhoud/bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis

Attribute Color to Gene

Description

Attribute Color to Gene

Usage

attriColorGene(df)

Arguments

df	data frame with mRNA or CNA or mutation frequency or methylation (numeric). Without sampleID column.

Value

A list colors for every gene

Examples

cgds <- cBioPortal(
hostname = "www.cbioportal.org",
protocol = "https",
api = "/api/v2/api-docs"
)
## Not run: 
getDataByGenes( api =  cgds,
studyId = "gbm_tcga_pub",
genes = c("NF1", "TP53", "ABL1"),
by = "hugoGeneSymbol",
molecularProfileIds = "gbm_tcga_pub_mrna"
)

## End(Not run)

kmezhoud/bioCancer documentation built on Feb. 17, 2024, 10:29 a.m.