getList_GenProfs: get list of genetic profiles of each selected study in...

View source: R/geNetClassifier.R

getList_GenProfsR Documentation

get list of genetic profiles of each selected study in Classifier panel

Description

get list of genetic profiles of each selected study in Classifier panel

Usage

getList_GenProfs(checked_Studies)

Arguments

checked_Studies

checked studies

Value

A list of genetics profiles

Examples

cgds <- cBioPortal(
hostname = "www.cbioportal.org",
protocol = "https",
api = "/api/v2/api-docs"
)
## Not run: 
getDataByGenes( api =  cgds,
studyId = "gbm_tcga_pub",
genes = c("NF1", "TP53", "ABL1"),
by = "hugoGeneSymbol",
molecularProfileIds = "gbm_tcga_pub_mrna"
)

## End(Not run)


kmezhoud/bioCancer documentation built on Feb. 17, 2024, 10:29 a.m.